The rxn_data_t structure and associated subroutines. More...

Data Types
interface	initialize
	Reaction initialization. Takes species, phase and reaction parameters and packs required information into the condensed data arrays for use during the model run. More...

interface	internal_bin_pack
	Extending-type binary pack function (Internal use only) More...

interface	internal_bin_unpack
	Extending-type binary unpack function (Internal use only) More...

interface	internal_pack_size
	Extending-type binary pack size (internal use only) More...

type	rxn_data_ptr
	Pointer type for building arrays of mixed reactions. More...

type	rxn_data_t
	Abstract reaction data type. More...

type	rxn_update_data_t
	Update cookie. More...

Functions/Subroutines
subroutine	load (this, json, j_obj)
	Load reactions from an input file.

logical function	check_phase (this, rxn_phase)
	Check the phase of the reaction against the phase being solved for. During GAS_RXN integrations, only GAS_RXN reactions are solved. During AERO_RXN integrations, only AERO_RXN and GAS_AERO_RXN reactions are solved. During GAS_AERO_RXN integrations, all reactions are solved.

integer(kind=i_kind) function	pack_size (this, comm)
	Determine the size of a binary required to pack the reaction data.

subroutine	bin_pack (this, buffer, pos, comm)
	Pack the given value to the buffer, advancing position.

subroutine	bin_unpack (this, buffer, pos, comm)
	Unpack the given value from the buffer, advancing position.

subroutine	do_print (this, file_unit)
	Print the reaction data.

elemental subroutine	dereference (this)
	Dereference a pointer to a reaction.

subroutine	ptr_finalize (this)
	Finalize a pointer to a reaction.

subroutine	ptr_finalize_array (this)
	Finalize an array of pointers to reactions.

integer(kind=c_int) function	rxn_update_data_get_type (this)
	Get the update data reaction type.

integer(kind=c_int) function	rxn_update_data_get_cell_id (this)
	Get the grid cell id to update.

type(c_ptr) function	rxn_update_data_get_data (this)
	Get the update data.

integer(kind=i_kind) function	rxn_update_data_pack_size (this, comm)
	Determine the size of a binary required to pack the reaction data.

subroutine	rxn_update_data_bin_pack (this, buffer, pos, comm)
	Pack the given value to the buffer, advancing position.

subroutine	rxn_update_data_bin_unpack (this, buffer, pos, comm)
	Unpack the given value from the buffer, advancing position.

subroutine	do_rxn_update_data_print (this, file_unit)
	Print the update data.

Variables
integer(kind=i_kind), parameter, public	gas_rxn = 1
	Gas-phase reaction.

integer(kind=i_kind), parameter, public	gas_aero_rxn = 2
	Mixed-phase (gas and aerosol) reaction.

integer(kind=i_kind), parameter, public	aero_rxn = 3
	Aerosol-phase reaction.

Detailed Description

The rxn_data_t structure and associated subroutines.

Function/Subroutine Documentation

◆ bin_pack()

subroutine camp_rxn_data::bin_pack	(	class(rxn_data_t), intent(in)	this,
		character, dimension(:), intent(inout)	buffer,
		integer, intent(inout)	pos,
		integer, intent(in)	comm )

private

Pack the given value to the buffer, advancing position.

Parameters

[in]	this	Reaction data
[in,out]	buffer	Memory buffer
[in,out]	pos	Current buffer position
[in]	comm	MPI communicator

Definition at line 434 of file rxn_data.F90.

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◆ bin_unpack()

subroutine camp_rxn_data::bin_unpack	(	class(rxn_data_t), intent(out)	this,
		character, dimension(:), intent(inout)	buffer,
		integer, intent(inout)	pos,
		integer, intent(in)	comm )

private

Unpack the given value from the buffer, advancing position.

Parameters

[out]	this	Reaction data
[in,out]	buffer	Memory buffer
[in,out]	pos	Current buffer position
[in]	comm	MPI communicator

Definition at line 462 of file rxn_data.F90.

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◆ check_phase()

logical function camp_rxn_data::check_phase	(	class(rxn_data_t), intent(in)	this,
		integer(kind=i_kind), intent(in)	rxn_phase )

private

Check the phase of the reaction against the phase being solved for. During GAS_RXN integrations, only GAS_RXN reactions are solved. During AERO_RXN integrations, only AERO_RXN and GAS_AERO_RXN reactions are solved. During GAS_AERO_RXN integrations, all reactions are solved.

Parameters

[in]	this	Reaction data
[in]	rxn_phase	Phase being solved

Definition at line 396 of file rxn_data.F90.

◆ dereference()

elemental subroutine camp_rxn_data::dereference ( class(rxn_data_ptr), intent(inout) this )

private

Dereference a pointer to a reaction.

Parameters

[in,out] this Pointer to a reaction

Definition at line 516 of file rxn_data.F90.

◆ do_print()

subroutine camp_rxn_data::do_print	(	class(rxn_data_t), intent(in)	this,
		integer(kind=i_kind), optional	file_unit )

private

Print the reaction data.

Parameters

[in]	this	Reaction data
	file_unit	File unit for output

Definition at line 491 of file rxn_data.F90.

◆ do_rxn_update_data_print()

subroutine camp_rxn_data::do_rxn_update_data_print	(	class(rxn_update_data_t), intent(in)	this,
		integer(kind=i_kind), optional	file_unit )

private

Print the update data.

Parameters

[in]	this	Reaction update data
	file_unit	File unit for output

Definition at line 700 of file rxn_data.F90.

◆ load()

subroutine camp_rxn_data::load	(	class(rxn_data_t), intent(inout)	this,
		type(json_core), intent(in), pointer	json,
		type(json_value), intent(in), pointer	j_obj )

private

Load reactions from an input file.

Parameters

[in,out]	this	Reaction data
[in]	json	JSON core
[in]	j_obj	JSON object

Definition at line 347 of file rxn_data.F90.

◆ pack_size()

integer(kind=i_kind) function camp_rxn_data::pack_size	(	class(rxn_data_t), intent(in)	this,
		integer, intent(in)	comm )

private

Determine the size of a binary required to pack the reaction data.

Parameters

[in]	this	Reaction data
[in]	comm	MPI communicator

Definition at line 416 of file rxn_data.F90.

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◆ ptr_finalize()

subroutine camp_rxn_data::ptr_finalize ( type(rxn_data_ptr), intent(inout) this )

private

Finalize a pointer to a reaction.

Parameters

[in,out] this Pointer to a reaction

Definition at line 528 of file rxn_data.F90.

◆ ptr_finalize_array()

subroutine camp_rxn_data::ptr_finalize_array ( type(rxn_data_ptr), dimension(:), intent(inout) this )

private

Finalize an array of pointers to reactions.

Parameters

[in,out] this Pointer to a reaction

Definition at line 540 of file rxn_data.F90.

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◆ rxn_update_data_bin_pack()

subroutine camp_rxn_data::rxn_update_data_bin_pack	(	class(rxn_update_data_t), intent(in)	this,
		character, dimension(:), intent(inout)	buffer,
		integer, intent(inout)	pos,
		integer, intent(in), optional	comm )

private

Pack the given value to the buffer, advancing position.

Parameters

[in]	this	Reaction update data
[in,out]	buffer	Memory buffer
[in,out]	pos	Current buffer position
[in]	comm	MPI communicator

Definition at line 629 of file rxn_data.F90.

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◆ rxn_update_data_bin_unpack()

subroutine camp_rxn_data::rxn_update_data_bin_unpack	(	class(rxn_update_data_t), intent(out)	this,
		character, dimension(:), intent(inout)	buffer,
		integer, intent(inout)	pos,
		integer, intent(in), optional	comm )

private

Unpack the given value from the buffer, advancing position.

Parameters

[out]	this	Reaction update data
[in,out]	buffer	Memory buffer
[in,out]	pos	Current buffer position
[in]	comm	MPI communicator

Definition at line 664 of file rxn_data.F90.

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◆ rxn_update_data_get_cell_id()

integer(kind=c_int) function camp_rxn_data::rxn_update_data_get_cell_id ( class(rxn_update_data_t), intent(in) this )

private

Get the grid cell id to update.

Returns: Grid cell id

Parameters

[in] this Update data

Definition at line 570 of file rxn_data.F90.

◆ rxn_update_data_get_data()

type(c_ptr) function camp_rxn_data::rxn_update_data_get_data ( class(rxn_update_data_t), intent(in) this )

private

Get the update data.

Returns: Update data ptr

Parameters

[in] this Update data

Definition at line 584 of file rxn_data.F90.

◆ rxn_update_data_get_type()

integer(kind=c_int) function camp_rxn_data::rxn_update_data_get_type ( class(rxn_update_data_t), intent(in) this )

private

Get the update data reaction type.

Returns: Reaction type

Parameters

[in] this Update data

Definition at line 556 of file rxn_data.F90.

◆ rxn_update_data_pack_size()

integer(kind=i_kind) function camp_rxn_data::rxn_update_data_pack_size	(	class(rxn_update_data_t), intent(in)	this,
		integer, intent(in), optional	comm )

private

Determine the size of a binary required to pack the reaction data.

Parameters

[in]	this	Reaction update data
[in]	comm	MPI communicator

Definition at line 598 of file rxn_data.F90.

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Variable Documentation

◆ aero_rxn

integer(kind=i_kind), parameter, public camp_rxn_data::aero_rxn = 3

Aerosol-phase reaction.

Definition at line 89 of file rxn_data.F90.

◆ gas_aero_rxn

integer(kind=i_kind), parameter, public camp_rxn_data::gas_aero_rxn = 2

Mixed-phase (gas and aerosol) reaction.

Definition at line 87 of file rxn_data.F90.

◆ gas_rxn

integer(kind=i_kind), parameter, public camp_rxn_data::gas_rxn = 1

Gas-phase reaction.

Definition at line 85 of file rxn_data.F90.

Data Types

Functions/Subroutines

Variables

Detailed Description

Function/Subroutine Documentation

◆ bin_pack()

◆ bin_unpack()

◆ check_phase()

◆ dereference()

◆ do_print()

◆ do_rxn_update_data_print()

◆ load()

◆ pack_size()

◆ ptr_finalize()

◆ ptr_finalize_array()

◆ rxn_update_data_bin_pack()

◆ rxn_update_data_bin_unpack()

◆ rxn_update_data_get_cell_id()

◆ rxn_update_data_get_data()

◆ rxn_update_data_get_type()

◆ rxn_update_data_pack_size()

Variable Documentation

◆ aero_rxn

◆ gas_aero_rxn

◆ gas_rxn